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Opensource codes segmentation
BiO-Net: Learning Recurrent Bi-directional Connections for Encoder-Decoder Architecture 0153 Bi-directionalskip connections, outperforms vainilla Unet https://github.com/tiangexiang/BiO-Net any modality:Cells Learning Semantics-EnrichedRepresentation via Self-discovery,Self-classification, and Self-restoration 0408 Semantic Genesis pretrainet 3D models: classification and segmentation in various medical modalities(i.e.,CT, MRI, and X-ray). and DATASETS! https://github.com/JLiangLab/SemanticGenesis and https://github.com/qubvel/segmentation_models CT, MRI and X-ray V-Net: Fully Convolutional Neural Networks forVolumetric Medical Image Segmentation 3DV 2016 fourth international conference on 3D vision (3DV): V-net implementation: a novel objective function https://github.com/Hsuxu/Magic-VNet 3D Volumes Deep Attentive Features for Prostate Segmentation in 3D Transrectal Ultrasound IEEE-tmi-2019 attention modules? https://github.com/wulalago/DAF3D 3D US: Prostate Hybrid attention for automatic segmentation of whole fetal head in ultrasound volumes CMP-B2020 Journal: Computer Methods and Programs in Biomedicine: hybridattention scheme(HAS)to select discriminative features and suppress the non-informative volumetric features https://github.com/wxde/USegNet-DS-HAS 3D US: Fetal head Volumetric Segmentation of Prostate from MR Images Using FCNN with Increased Receptive Field Nvidia??? Nvidia GTC 2019: Based on V-net https://github.com/amanbasu/3d-prostate-segmentation 3D MRI Vox2Vox: 3D-GAN for Brain Tumour Segmentation ???? ???? https://github.com/chinokenochkan/vox2vox multi-modal MRI DenseVoxNet and 3D-DSN ???? ???? https://github.com/yulequan/HeartSeg volumes matlab LiviaNET. 3D fully Convolutional Neural Network for semantic image segmentation: 3D fully convolutional networks for subcortical segmentation in MRI: A large-scale study N_I2017 Neuroimage, April,17th 2017: https://github.com/josedolz/LiviaNET and https://github.com/josedolz/LiviaNet_pytorch MRI= Brain Hyperdensenet ???? https://github.com/josedolz https://github.com/josedolz/HyperDenseNet_pytorch AND https://github.com/josedolz/HyperDenseNet#training volumes matlab
Opensource codes 3D Reconstruction
Data augmentation Automatic Data Augmentation for 3DMedical Image Segmentation 0921 nnUnet code https://github.com/MIC-DKFZ/nnUNet any modality Reconstruction Sensorless Freehand 3D Ultrasound Reconstruction via Deep Contextual Learning 1111 New loss and CAM maps https://github.com/DIAL-RPI/FreehandUSRecon 3D US